Files

46 lines
1.6 KiB
Tcl

# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
PortSystem 1.0
PortGroup github 1.0
PortGroup legacysupport 1.1
# strnlen
legacysupport.newest_darwin_requires_legacy 10
github.setup samtools samtools 1.23.1
revision 0
checksums rmd160 d2fd92f08b59a1404894dfbd036abcbb5253fbbc \
sha256 32266198a4bc6a6df395d8526688c9697d9c8e472f888c749fdde2e08ea88dd2 \
size 9468164
categories science
maintainers {ryandesign @ryandesign} openmaintainer
license MIT
description Tools for alignments in the SAM format
long_description SAM (Sequence Alignment/Map) Tools provide various \
utilities for manipulating alignments in the SAM \
format, including sorting, merging, indexing and \
generating alignments in a per-position format.
homepage https://www.htslib.org
github.tarball_from releases
use_bzip2 yes
depends_lib port:htslib \
port:ncurses \
port:zlib
configure.args --with-htslib=system
post-destroot {
xinstall -d ${destroot}${prefix}/share/doc/${name}
xinstall -m 0644 -W ${worksrcpath} \
AUTHORS LICENSE NEWS.md README \
${destroot}${prefix}/share/doc/${name}
}
test.run yes
test.target check