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contextnerrorandHerby Gillot
c50e74bd31
* Use https * Remove platforms darwin * Update checksum types
55 lines
2.1 KiB
Tcl
55 lines
2.1 KiB
Tcl
# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
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PortSystem 1.0
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name cell-id
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version 1.4.6
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revision 2
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categories science biology
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license LGPL-2.1+
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maintainers fbmc.fcen.uba.ar:abush
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description Microscopy based cytometry segmentation software
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long_description Cell-ID is a command line software that segments bright field \
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microscopy images of yeast and mammalian cells, tracks cells \
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over time and quantifies morphological and fluorescence \
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features for each cell.
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homepage https://sourceforge.net/projects/cell-id
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master_sites sourceforge:project/cell-id
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distname cell_id_${version}
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livecheck.regex /cell_id_(\\d+(?:\\.\\d+)*)
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use_zip yes
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checksums rmd160 1406f30acdd62d87f1135eaa5b8e791663237c70 \
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sha256 43fed46ef32bd4a45e75e77f78a5ec52b3500634a5561c09a5d033b50d04710b \
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size 524550
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depends_lib path:lib/pkgconfig/glib-2.0.pc:glib2 \
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port:tiff
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post-patch {
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reinplace "s|-static|${configure.cflags} ${configure.cc_archflags}|g" ${worksrcpath}/Makefile
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reinplace "s|-I/local|-I${prefix}|g" ${worksrcpath}/Makefile
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reinplace "s|-L/local/lib|-I${prefix}/lib/glib-2.0/include -L${prefix}/lib|g" ${worksrcpath}/Makefile
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reinplace "s|rm cell|rm -f cell|g" ${worksrcpath}/Makefile
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reinplace "s|gcc|\$(CC)|g" ${worksrcpath}/Makefile
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}
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use_configure no
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pre-build {
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system -W ${worksrcpath} "${build.cmd} clean"
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}
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build.target cell
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build.env CC=${configure.cc}
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use_parallel_build no
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destroot {
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xinstall ${worksrcpath}/cell ${destroot}${prefix}/bin/cell
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xinstall -d ${destroot}${prefix}/share/doc/${name}
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xinstall -m 644 -W ${worksrcpath} Cell-ID-help.txt GNU_Lesser_General_Public_License.txt \
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README.txt cell_id_description_of_output_file_R.txt \
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cell_id_description_of_output_files_PAW.txt parameters.txt \
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${destroot}${prefix}/share/doc/${name}
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}
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