mirror of
https://github.com/macports/macports-ports.git
synced 2026-07-12 18:20:25 -07:00
Lawrence VelázquezandMojca Miklavec
34b3070336
for pf in */*/Portfile
do
ed -s "$pf" <<-'EOF'
1,3g/^[[:space:]]*#[[:space:]]*\$Id.*\$[[:space:]]*$/d
1g/^[[:space:]]*$/d
w
q
EOF
done
41 lines
1.5 KiB
Tcl
41 lines
1.5 KiB
Tcl
# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
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PortSystem 1.0
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name PEAR
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version 0.9.8
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categories science
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platforms darwin
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license CC-BY-NC-SA-3
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maintainers yahoo.com:mashavecher
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description PEAR - Paired-End reAd mergeR
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long_description PEAR is an ultrafast, memory-efficient and highly \
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accurate pair-end read merger. It is fully parallelized \
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and can run with as low as just a few kilobytes of memory.
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homepage http://www.exelixis-lab.org/web/software/pear
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master_sites http://sco.h-its.org/exelixis/web/software/pear/files/
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distname pear-${version}
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checksums rmd160 c9703233b188527dcd281f6a2cc5f924a3a3828a \
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sha256 0fff7401d63141d9235aa28174113f346a039743c0c679b435f5230a32b28728
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depends_lib port:bzip2 \
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port:zlib
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patchfiles patch-configure.diff
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notes "
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The PEAR creative commons license prohibits commercial use of the code.\
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For testing and using PEAR on a commercial basis you need to purchase a\
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commercial software license.\
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If you wish to purchase such a license please contact:
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Prof. Alexandros Stamatakis <Alexandros.Stamatakis@h-its.org>
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Citation - PEAR: a fast and accurate Illumina Paired-End reAd mergeR
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Zhang et al (2014) Bioinformatics 30(5): 614-620 | doi:10.1093/bioinformatics/btt593
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"
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