diff --git a/pcsx2/Config.h b/pcsx2/Config.h
index 41263af153..7053d60c98 100644
--- a/pcsx2/Config.h
+++ b/pcsx2/Config.h
@@ -551,8 +551,10 @@ enum class GSUserHackOverride : u8
 	AutoFlush,
 	TextureInsideRt,
 	// Appended rather than slotted in next to X, so a mask already written to an INI keeps
-	// meaning what it meant.
+	// meaning what it meant. Everything below follows the same rule: append only.
 	TextureOffsetY,
+	PreloadFrameData,
+	DisablePartialInvalidation,
 	MaxCount
 };
 
diff --git a/pcsx2/GameDatabase.cpp b/pcsx2/GameDatabase.cpp
index 03ffd21f1f..f386d24e50 100644
--- a/pcsx2/GameDatabase.cpp
+++ b/pcsx2/GameDatabase.cpp
@@ -510,6 +510,10 @@ static std::optional<GSUserHackOverride> UserHackOverrideForHWFix(GameDatabaseSc
 			return GSUserHackOverride::AutoFlush;
 		case GameDatabaseSchema::GSHWFixId::TextureInsideRT:
 			return GSUserHackOverride::TextureInsideRt;
+		case GameDatabaseSchema::GSHWFixId::PreloadFrameData:
+			return GSUserHackOverride::PreloadFrameData;
+		case GameDatabaseSchema::GSHWFixId::DisablePartialInvalidation:
+			return GSUserHackOverride::DisablePartialInvalidation;
 		default:
 			return std::nullopt;
 	}
diff --git a/pcsx2/Pcsx2Config.cpp b/pcsx2/Pcsx2Config.cpp
index 3f3ff3394e..c9713ff8b2 100644
--- a/pcsx2/Pcsx2Config.cpp
+++ b/pcsx2/Pcsx2Config.cpp
@@ -1257,12 +1257,14 @@ void Pcsx2Config::GSOptions::MaskUserHacks(bool respect_claims)
 		UserHacks_TCOffsetX = 0;
 	if (!keep(GSUserHackOverride::TextureOffsetY))
 		UserHacks_TCOffsetY = 0;
+	if (!keep(GSUserHackOverride::PreloadFrameData))
+		PreloadFrameWithGSData = false;
+	if (!keep(GSUserHackOverride::DisablePartialInvalidation))
+		UserHacks_DisablePartialInvalidation = false;
 
 	UserHacks_DisableSafeFeatures = false;
 	UserHacks_DisableRenderFixes = false;
 	GPUPaletteConversion = false;
-	PreloadFrameWithGSData = false;
-	UserHacks_DisablePartialInvalidation = false;
 	UserHacks_DisableDepthSupport = false;
 	UserHacks_CPUFBConversion = false;
 	UserHacks_ReadTCOnClose = false;